Package: coloc
Type: Package
Imports: data.table, ggplot2, methods, viridis, matrixStats, stats,
        grDevices, susieR (>= 0.12.06), utils
Suggests: knitr, testthat, mvtnorm, magrittr, rmarkdown,
        EnsDb.Hsapiens.v86, EnsDb.Hsapiens.v75, locuszoomr, gridExtra
Title: Colocalisation Tests of Two Genetic Traits
Version: 6.0.3
Date: 2026-04-17
Authors@R: c(person("Chris", "Wallace", role=c("aut","cre"), email = "cew54@cam.ac.uk"),
    person("Claudia","Giambartolomei", role="aut", email="claudia.giambartolomei.10@ucl.ac.uk"),
    person("Vincent","Plagnol", role="ctb", email="v.plagnol@ucl.ac.uk"),
    person("Tom","Willis", role="aut", email="tom.willis@live.com"),
    person("Jeffrey","Pullin", role="aut", email="jp2045@cam.ac.uk"))
Maintainer: Chris Wallace <cew54@cam.ac.uk>
Description: Performs the colocalisation tests described in
        Giambartolomei et al (2013) <doi:10.1371/journal.pgen.1004383>,
        Wallace (2020) <doi:10.1371/journal.pgen.1008720>, Wallace
        (2021) <doi:10.1371/journal.pgen.1009440>, Pullin and Wallace
        (2025) <doi:10.1101/2024.08.21.608957>.
License: GPL
LazyLoad: yes
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Encoding: UTF-8
URL: https://github.com/chr1swallace/coloc,
        https://chr1swallace.github.io/coloc/
BugReports: https://github.com/chr1swallace/coloc/issues
Collate: 'coloc-package.R' 'boundaries.R' 'check.R' 'claudia.R'
        'plot.R' 'private.R' 'sensitivity.R' 'split.R' 'susie.R'
        'data.R' 'zzz.R'
Depends: R (>= 3.5)
LazyData: true
Repository: https://chr1swallace.r-universe.dev
Date/Publication: 2026-10-16 13:40:00 UTC
RemoteUrl: https://github.com/chr1swallace/coloc
RemoteRef: HEAD
RemoteSha: 27776b1bb14e19d1542798ac7477fa378fc2fc0d
NeedsCompilation: no
Packaged: 2026-10-16 18:05:59 UTC; root
Author: Chris Wallace [aut, cre],
  Claudia Giambartolomei [aut],
  Vincent Plagnol [ctb],
  Tom Willis [aut],
  Jeffrey Pullin [aut]