Package: colocPropTest
Title: Proportional Testing for Colocalisation Analysis
Version: 0.9.3
Authors@R: 
    person("Chris", "Wallace", email="cew54@cam.ac.uk", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-9755-1703"))
Description: Colocalisation analysis tests whether two traits share a
        causal genetic variant in a specified genomic region.
        Proportional testing for colocalisation has been previously
        proposed [Wallace (2013) <doi:10.1002/gepi.21765>], but is
        reimplemented here to overcome barriers to its adoption. Its
        use is complementary to the fine- mapping based colocalisation
        method in the 'coloc' package, and may be used in particular to
        identify false "H3" conclusions in 'coloc'.
License: GPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Depends: magrittr, data.table
Imports: car, coloc, graphics, stats, utils
Suggests: knitr, plotrix, testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-06-17 09:02:47 UTC; root
Author: Chris Wallace [aut, cre] (ORCID:
        <https://orcid.org/0000-0001-9755-1703>)
Maintainer: Chris Wallace <cew54@cam.ac.uk>
Config/pak/sysreqs: cmake make libicu-dev
Repository: https://chr1swallace.r-universe.dev
Date/Publication: 2025-09-16 10:47:44 UTC
RemoteUrl: https://github.com/chr1swallace/colocproptest
RemoteRef: HEAD
RemoteSha: f8dfc43d8b7fa353740bf9398ab181338fba910e