Package: genomic.autocorr 1.0-1

genomic.autocorr: Models Dealing with Spatial Dependency in Genomic Data

Local structure in genomic data often induces dependence between observations taken at different genomic locations. Ignoring this dependence leads to underestimation of the standard error of parameter estimates. This package uses block bootstrapping to estimate asymptotically correct standard errors of parameters from any standard generalised linear model that may be fit by the glm() function.

Authors:Chris Wallace [aut, cre], Oliver Burren [aut]

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genomic.autocorr.pdf |genomic.autocorr.html
genomic.autocorr/json (API)

# Install 'genomic.autocorr' in R:
install.packages('genomic.autocorr', repos = c('https://chr1swallace.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/chr1swallace/genomic.autocorr/issues

On CRAN:

2.70 score 3 scripts 192 downloads 2 exports 5 dependencies

Last updated 6 years agofrom:764dcfe4b1. Checks:OK: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 25 2024
R-4.5-winWARNINGOct 25 2024
R-4.5-linuxWARNINGOct 25 2024
R-4.4-winWARNINGOct 25 2024
R-4.4-macWARNINGOct 25 2024
R-4.3-winWARNINGOct 25 2024
R-4.3-macWARNINGOct 25 2024

Exports:acf.summaryblock.glm

Dependencies:data.tablemagrittrplyrRcppreshape