coloc - Colocalisation Tests of Two Genetic Traits
Performs the colocalisation tests described in Giambartolomei et al (2013) <doi:10.1371/journal.pgen.1004383>, Wallace (2020) <doi:10.1371/journal.pgen.1008720>, Wallace (2021) <doi:10.1371/journal.pgen.1009440>.
Last updated 9 days ago
12.25 score 148 stars 3 packages 896 scripts 1.4k downloadsgenomic.autocorr - Models Dealing with Spatial Dependency in Genomic Data
Local structure in genomic data often induces dependence between observations taken at different genomic locations. Ignoring this dependence leads to underestimation of the standard error of parameter estimates. This package uses block bootstrapping to estimate asymptotically correct standard errors of parameters from any standard generalised linear model that may be fit by the glm() function.
Last updated 6 years ago
2.70 score 3 scripts 192 downloads